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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935669.1_cds_XP_016481455.1_72781
CDS Infomation

[gene=LOC107802460] [db_xref=GeneID:107802460] [protein=putative clathrin assembly protein At2g01600] [protein_id=XP_016481455.1] [location=join(6149..6238,6417..6486,7200..7297,12198..12336,12429..12556,15381..15473,15611..15661,15975..16040,16151..16216,16345..16425,16512..16592,16756..16941,17048..17123,17233..17351,17627..17971)] [gbkey=CDS]
Sequence

ATGGGTACGCTTCAAAGTTGGAGGAAAGCCTATGGAGCTCTCAAAGACCACACAAAAGTT
GGCCTTGCCCATGTTAATAGCGATTTCAAGGATGTGGATGTGGCGATCGTTAAGGCTACG
AATCATGTTGAGTGCCCACCAAAAGACAGACATCTTAGAAAGATTTTGGTTTATACATCA
GCGATGCGGCCTCGTGCTGATGTTGCTTACTGCATACATGCACTTGCGAGGCGATTGGCA
AAGACACATAATTGGACGGTAGCACTGAAGACATTGATAGTAATCCACAGAACATTGAGG
GAAGGTGATCCAACTTTTAGAGAGGAACTGCTGAATTTCCATCAGAGAGGACGCATTCTC
CAAATGTCCAATTTCAAGGATGATTCAAGCCCAATTGCTTGGGACTGCTCAGCGTGGGTA
CGAACATATGCACTCTTTCTGGAAGAACGGCTTGAATGCTTTAGGGTTATGAAGTATGAT
ATTGAAGGAGAGCGCCTTCCTAAACCTGCCCAAGGGCAAGAAAAGGGATACAGCAAAACA
AGGGAGTTGCCCAGTGAGGAACTTTTGGAGCAGTTACCTGCTTTGCAGCAGTTGTTGTAT
CGTCTTATTGGATGTCGGCCTGAGGGAGCAGCAGTTGGAAATTATGTGATTCAATATGCC
CTTGCCCTGGTCCTCAAGGAGAGCTTCAAAATCTATTGTGCTATAAATGATGGAATAATT
AATCTTATTGACAAGTTTTTTGACATGCCAAGACATGAAGCTATTAAGGCCCTTGGTATC
TACAAAAGAGCTGGCCAGCAGGCCATGAGCCTCTCCGACTTTTATGAGGTTTGCAAAGGC
TTGGAACTTGCCAGGAACTTTCAGTTTCCTGTGTTGAGAGAGCCTCCTCAGTCCTTCCTT
GTGACCATGGAAGAGTATATAAAAGAAGCACCCCGCATAGTTTCTGTCCCAATAGAAACA
TTGGAATATCCTGAGAGGCTTATGTTGACCTATAAACAAGAGGATGAACCTTCAGCTTCT
GAAGATGCTGAAGAATCAGCTAATGAAACTAAACCTCCGCCTTCAGATGATACTGTTGTT
TCAACCTCTGAGGCTCCTGCCCCGCCAGTGCAGCCGCCTCCAAGCAGCTTGGAAACTGAT
GATTTACTGGGGCTCAATACACCAACTGGTTATGCATCAGCAATCGAGGAAAGCAATGCT
TTGGCTTTAGCAATAGTACCATCTGGGACAACACCGTTTGACTCAAACCCTGCTCAGCCA
AAAGATTTTGATCCTACTGGATGGGAACTTGCCCTGGTCACTACTCCTAGCAGCGACTTA
TCTGCAGCTCATGAGAGACAATTGGCTGGTGGATTGGACTCCCTCACGCTCAATAGTTTG
TATGATGAAGGAGCATATAGAGCATCTCAACAACCAGTATATGGACAACCAGCCCCTAAT
CCTTTCGAAGTTGCTGATCCATTTGTCATGTCTAGTACCATGCCTCCCCCTCCATCCGTG
CAAATGGCTATGGCGCCTCAGCATCAAATGAATCCTTTTGGACCATTCCAACCTGCCTAT
CCACAGCCCCAAAATCCAATGATGAATCCACACAATCCTTTTGGCGATGCAGGGTTCAGC
GCATTTCCTGCTAATAATGTTGCTCATCCACAAACAACCAATCCTTTCGGGAGCACTGGC
CTGATATAG

Peptide Sequence

PEP ID

XP_016481455.1
PEP Infomation

PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana tabacum]
Sequence

MGTLQSWRKAYGALKDHTKVGLAHVNSDFKDVDVAIVKATNHVECPPKDRHLRKILVYTS
AMRPRADVAYCIHALARRLAKTHNWTVALKTLIVIHRTLREGDPTFREELLNFHQRGRIL
QMSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVMKYDIEGERLPKPAQGQEKGYSKT
RELPSEELLEQLPALQQLLYRLIGCRPEGAAVGNYVIQYALALVLKESFKIYCAINDGII
NLIDKFFDMPRHEAIKALGIYKRAGQQAMSLSDFYEVCKGLELARNFQFPVLREPPQSFL
VTMEEYIKEAPRIVSVPIETLEYPERLMLTYKQEDEPSASEDAEESANETKPPPSDDTVV
STSEAPAPPVQPPPSSLETDDLLGLNTPTGYASAIEESNALALAIVPSGTTPFDSNPAQP
KDFDPTGWELALVTTPSSDLSAAHERQLAGGLDSLTLNSLYDEGAYRASQQPVYGQPAPN
PFEVADPFVMSSTMPPPPSVQMAMAPQHQMNPFGPFQPAYPQPQNPMMNPHNPFGDAGFS
AFPANNVAHPQTTNPFGSTGLI

Transcript Sequence

Gene sequence data has not been registered.